RabbitFX: Efficient Framework for FASTA/Q File Parsing on Modern Multi-Core Platforms.

Documentation

• RabbitFX Tutorial
  • Installation
    • Dependency
    • Using Cmake
    • Using build libray
    • Build with libisal libray for processing gziped file faster
  • Highlight
  • Illustration
  • Case study
  • Runing Example in main.cpp and TestCount.cpp
  • FASTQ data example
    • Single-end data processing example
    • Pair-end data processing example
  • FASTA data example
  • Cite
• RabbitFX Casestudies
  • RabbitFX-Ktrim
    • Installation
    • Usage
    • Example 1
    • Example 2
  • RabbitFX-fastp
    • Build
    • Simple usage
  • RabbitFX-Mash
    • Build
    • Simple Usage
• API Reference
  • FastxChunk
  • ChunkFormater
  • Sequencing data
  • DataPool
  • DataQueue
  • Buffer